This repository gathers code for the paper:
Uncovering the organization of neural circuits with generalized phase locking analysis
This repository has the following structure:
#+RESULTS[533444a45df6f39b1bfca93012307dd90a7a03e6]:
./ ├── localdata │ ├── biophysWaveSimul │ ├── dataHPsim │ ├── explorations │ └── handies ├── src │ ├── methods │ ├── simulations │ ├── unclassified │ └── utilities └── visualizations ├── figure2 ├── figure3 ├── figure4 ├── figure6 ├── figure7 └── figure8 20 directories
MATLAB codes provided in the ‘visualizations’ folder can be used to reproduce the main figures of this paper (except the schematic figures).
To reproduce the figures, you need a brief setup as explained below.
- Clone/download the content of the repository in your desired location,
- Download
localdata
from this repository - start MATLAB and cd to your chosen location, and
addpath
the location (no nested addpath is required)
addpath path/to/your/desired/location
- run the
ignit.m
file
run ignit