Shi Lab

Pinned Repositories

DP-MIA
Differential Privacy Protection against MembershipInference Attack on Machine Learning for Genomic Data
Language:Python16 1 04
EBEN-epistasis
Language:R2 3 01
Hi-C-integrative-catalog
Integrative TAD Catalog and TAD-SVs
Language:Jupyter Notebook2 2 00
meQTL_functions
Language:R2 12 141
MLP-SAE
Language:R3 7 13
PAR-GAN
PAR-GAN: Improving the Generalization of Generative Adversarial Networks Against Membership Inference Attacks
Language:Jupyter Notebook5 2 03
parEBEN
Parallel Implementations of the Empirical Bayesian Elastic Net Cross-Validation in R
Language:C2 1 00
PG-cGAN
Population-scale Genomics Data Augmentation Based on Conditional Generative Adversarial Networks
Language:Jupyter Notebook8 4 03
SCDA
Sparse Convolutional Denoising Autoencoders for Genotype Imputation
Language:Jupyter Notebook4 1 00
STI
Split Transformer Impute source code
Language:Jupyter Notebook11 2 02

Shi Lab's Repositories

shilab/DP-MIA
Differential Privacy Protection against MembershipInference Attack on Machine Learning for Genomic Data
Language:Python16 1 04
shilab/STI
Split Transformer Impute source code
Language:Jupyter Notebook11 2 02
shilab/PG-cGAN
Population-scale Genomics Data Augmentation Based on Conditional Generative Adversarial Networks
Language:Jupyter Notebook8 4 03
shilab/PAR-GAN
PAR-GAN: Improving the Generalization of Generative Adversarial Networks Against Membership Inference Attacks
Language:Jupyter Notebook5 2 03
shilab/SCDA
Sparse Convolutional Denoising Autoencoders for Genotype Imputation
Language:Jupyter Notebook4 1 00
shilab/Hi-C-integrative-catalog
Integrative TAD Catalog and TAD-SVs
Language:Jupyter Notebook2 2 00
shilab/parEBEN
Parallel Implementations of the Empirical Bayesian Elastic Net Cross-Validation in R
Language:C2 1 00
shilab/ADNI
predict ADAS and MMSE score based on genotype
Language:Jupyter Notebook1 1 0
shilab/GenoDiffusion
GenoDiffusion: Conditional Denoising Diffusion Probabilistic Model for Genomic Data Augmentation
Language:Python1 3 01
shilab/Malaria-dsRNA-Transcriptome-Project
Language:R1 3 00
shilab/MicroRNA-Gene-Network-Colon
Language:R1 2 0
shilab/YeastPhenotypeClassification
Yeast Phenotype Prediciton
Language:Jupyter Notebook1 1 01
shilab/FSF-GA
Language:Python0 3 01
shilab/HiCMap
Language:Jupyter Notebook00
shilab/Awesome-Book-paper-tool
A curated list of amazing book, libraries, software and resources.
2 01
shilab/awesome-differential-privacy
list of differential-privacy related repositories
1 0
shilab/cancer-data
Language:Python
shilab/CNVmQTL
Language:R
shilab/Courses
Language:Python3 0
shilab/E2EGraph
2 0
shilab/EpiML
Language:JavaScript3 0
shilab/FedDP
Language:Python2 0
shilab/Forest-GAN
Language:Jupyter Notebook0 0
shilab/Genetic-Privacy-and-Security
Slides and Tutorials
1
shilab/LiteratureDL4Graph
1 0
shilab/MIP-SHE
This is the repository of membership inference perturbed- sparse homomorphic encryption model.
Language:Jupyter Notebook1
shilab/Offspring-GAN
This repository includes 1. code for offspring GAN 2. code for evaluation of synthetic data from offspring GAN 3. PCA plots for synthetic data generated by 3 diffferent GAN models.
Language:HTML2 0
shilab/SCP_DAE
A Sparse Convolutional Predictor with Denoising Autoencoders for Phenotype Prediction
Language:Python1 0
shilab/TopoDiffusion
This is the repository for TopoDiffusion model.
shilab/UKBB_data
3 0