Pinned Repositories
BehavioralAnalysisSuite
Developed by Ari Morcos, Updated by Shin Kira
Suite2P
Tools for processing 2P recordings
neuralSPRT
Physiology data sharing project
Acquisition2P_class
For managing 2P imaging datasets from preprocessing to activity trace extraction
ADNS-9800
Avago ADNS-9800 Test
BiologicallyPlausibleLearningRNN
BrewerMap
[MATLAB] The complete palette of ColorBrewer colormaps. Simple selection by scheme name and map length.
cleanBib
Probabilistically assign gender and race proportions of first/last authors pairs in bibliography entries
cracking_the_neural_code_paper_material
This MATLAB code runs the simulations used in the paper "Cracking the Neural Code for Sensory Perception by Combining Statistics, Intervention and Behavior", by S. Panzeri, C. D. Harvey, E. Piasini, P. E. Latham and T. Fellin.
shinkira's Repositories
shinkira/Acquisition2P_class
For managing 2P imaging datasets from preprocessing to activity trace extraction
shinkira/neuralSPRT
Physiology data sharing project
shinkira/neurogym
A curated collection of neuroscience tasks with a common interface.
shinkira/helperFunctions
Common functions that may be used by all other functions in the Harvey Lab code base.
shinkira/XR-Interaction-Toolkit-Examples
This repository contains various examples to use with the XR Interaction Toolkit
shinkira/npy-matlab
Experimental code to read/write NumPy .NPY files in MATLAB
shinkira/libsvm
shinkira/glmnet
:exclamation: This is a read-only mirror of the CRAN R package repository. glmnet — Lasso and Elastic-Net Regularized Generalized Linear Models. Homepage: http://www.jstatsoft.org/v33/i01/.
shinkira/Suite2P
Tools for processing 2P recordings
shinkira/BehavioralAnalysisSuite
Developed by Ari Morcos, Updated by Shin Kira
shinkira/nn-brain
Tutorial codes for modeling brains with neural nets
shinkira/ngym_usage
shinkira/multitask
Code for Task representations in neural networks trained to perform many cognitive tasks
shinkira/mouseVR
Harvey Lab miniaturized mouse VR rig for virtual navigation and decision-making tasks
shinkira/preprint_templates
shinkira/BrewerMap
[MATLAB] The complete palette of ColorBrewer colormaps. Simple selection by scheme name and map length.
shinkira/Cupid
MATLAB toolbox for working with univariate probability distributions
shinkira/dPCA
An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)
shinkira/shablona
A template for small scientific python projects
shinkira/spyder
Official repository for Spyder - The Scientific Python Development Environment
shinkira/torch_tem
Implementation of the Tolman Eichenbaum Machine in pytorch
shinkira/cleanBib
Probabilistically assign gender and race proportions of first/last authors pairs in bibliography entries
shinkira/oTDR
Optimal targeted dimensionality reduction and associated metrics and statistics
shinkira/widefieldImaging
Code to perform and analyze widefield imaging (i.e. intrinsic, autofluorescence, and GCaMP widefield).
shinkira/glmnet_matlab
MATLAB version of glmnet
shinkira/PMW3360DM-T2QU
https://www.tindie.com/products/jkicklighter/pmw3360dm-t2qu-motion-sensor/
shinkira/datajoint-matlab
High-level relational database interface for MATLAB
shinkira/mym
MySQL API for MATLAB with support for BLOB objects
shinkira/ADNS-9800
Avago ADNS-9800 Test
shinkira/knitr
A general-purpose tool for dynamic report generation in R