sifrimlab
KU Leuven research group that aims to develop novel computational methodologies for data fusion and pattern recognition.
Belgium
Pinned Repositories
enteric_neuron_tools
This repository contains both a script and a gui to process .czi images and count and segment enteric neurons that are visualized on one of the channels.
Probedesign
MERFISH Probe design test
pyrodsCLI
pyxelperfect
Collection of image-processing tools for bioinformatic applications
Restricted-Kernel-Machines
scAAE
Adversarial Autoencoder for single cell data
scVAE
segmentation_benchmark
sifrimlab.github.io
Source code for LMIB website
ST-nextflow-pipeline
This repository contains the entire codebase necessary to pilot STAPLE, an automated end-to-end pipeline that processes Spatial Transcriptomics datasets.
sifrimlab's Repositories
sifrimlab/pyxelperfect
Collection of image-processing tools for bioinformatic applications
sifrimlab/scVAE
sifrimlab/scAAE
Adversarial Autoencoder for single cell data
sifrimlab/ST-nextflow-pipeline
This repository contains the entire codebase necessary to pilot STAPLE, an automated end-to-end pipeline that processes Spatial Transcriptomics datasets.
sifrimlab/enteric_neuron_tools
This repository contains both a script and a gui to process .czi images and count and segment enteric neurons that are visualized on one of the channels.
sifrimlab/ibp-human-gut-cell-atlas-analysis
sifrimlab/LatInt
sifrimlab/Probedesign
MERFISH Probe design test
sifrimlab/pyrodsCLI
sifrimlab/Restricted-Kernel-Machines
sifrimlab/segmentation_benchmark
sifrimlab/sifrimlab.github.io
Source code for LMIB website