Pinned Repositories
ADS_final_project
ADVANCED_ALGEBRA_PROJECT_2024
This project implements arithmetic in finite fields of cardinality (p^n) for a given prime (p) and natural number (n). An (n)-dimensional extension of the prime field (k = \mathbb{F}_p) is constructed using an irreducible polynomial (f(x)) in (k[x]).
comp_bio_ex3
dropSeqPipe
A SingleCell RNASeq pre-processing snakemake workflow
EyeMovement_Analysis_Tool
A tool for visual analysis of eye movements, developed in MATLAB and Python. It processes eye movement data from visual stimuli, providing heatmaps and eye movement paths. Supports individual and group analysis, helping researchers identify patterns and study the link between eye movements and memory.
Matlab_Protein_Project
Visualization of proteins using MATLAB and measurement of distances between the atoms of the protein and the atoms of the ligands bound to it
mGenes
LevHai Parser version 2.4 processes Partek analysis output files, converting them into comprehensive CSV reports with genotype data for each sample. The repository includes scripts for developers and executables for users to facilitate easy parsing and analysis of genetic data.
scRNA_AdvancedEmbeddings
Enhance K-means clustering for single-cell data analysis by integrating advanced embedding techniques like Universal Cell Embeddings (UCE) and Cell2Sentence. Compare with original data and PCA. Improve K-means++ by adjusting for cell density to maintain performance in high-dimensional, variable density, and biologically complex data.
sigalgrabois
UCE
UCE is a zero-shot foundation model for single-cell gene expression data
sigalgrabois's Repositories
sigalgrabois/dropSeqPipe
A SingleCell RNASeq pre-processing snakemake workflow
sigalgrabois/EyeMovement_Analysis_Tool
A tool for visual analysis of eye movements, developed in MATLAB and Python. It processes eye movement data from visual stimuli, providing heatmaps and eye movement paths. Supports individual and group analysis, helping researchers identify patterns and study the link between eye movements and memory.
sigalgrabois/ADS_final_project
sigalgrabois/ADVANCED_ALGEBRA_PROJECT_2024
This project implements arithmetic in finite fields of cardinality (p^n) for a given prime (p) and natural number (n). An (n)-dimensional extension of the prime field (k = \mathbb{F}_p) is constructed using an irreducible polynomial (f(x)) in (k[x]).
sigalgrabois/comp_bio_ex3
sigalgrabois/Matlab_Protein_Project
Visualization of proteins using MATLAB and measurement of distances between the atoms of the protein and the atoms of the ligands bound to it
sigalgrabois/mGenes
LevHai Parser version 2.4 processes Partek analysis output files, converting them into comprehensive CSV reports with genotype data for each sample. The repository includes scripts for developers and executables for users to facilitate easy parsing and analysis of genetic data.
sigalgrabois/scRNA_AdvancedEmbeddings
Enhance K-means clustering for single-cell data analysis by integrating advanced embedding techniques like Universal Cell Embeddings (UCE) and Cell2Sentence. Compare with original data and PCA. Improve K-means++ by adjusting for cell density to maintain performance in high-dimensional, variable density, and biologically complex data.
sigalgrabois/sigalgrabois
sigalgrabois/UCE
UCE is a zero-shot foundation model for single-cell gene expression data