Pinned Repositories
simomarsili's Repositories
simomarsili/ndd
Bayesian entropy estimation in Python - via the Nemenman-Schafee-Bialek algorithm
simomarsili/pcdhit
Python interface to cd-hit
simomarsili/elss
energy landscapes in sequence space
simomarsili/little-bio-parser
A minimalistic parser for sequence alignments.
simomarsili/mmdemux
simomarsili/biodada
biodada
simomarsili/cleanset
data cleaner
simomarsili/equilibrated_systems
simomarsili/essays-on-data-science
In which I put together my thoughts on the practice of data science.
simomarsili/fmpl
Structure learning for discrete graphical models
simomarsili/gopen
generic open
simomarsili/listmap
listmap
simomarsili/mmlite
simomarsili/mpl
simomarsili/ndd-feedstock
A conda-smithy repository for ndd.
simomarsili/ndd-wheels
platform-specific python wheels for the ndd package
simomarsili/openmm
OpenMM is a toolkit for molecular simulation using high performance GPU code.
simomarsili/repo-templates
simomarsili/scikit-learn
scikit-learn: machine learning in Python
simomarsili/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
simomarsili/venv_tools
Virtual environments utils.
simomarsili/yank
An open, extensible Python framework for GPU-accelerated alchemical free energy calculations.