Pinned Repositories
bactopia
A flexible pipeline for complete analysis of bacterial genomes
bioconda-recipes
Conda recipes for the bioconda channel.
codon-usage-tables
:bar_chart: Codon usage tables in code-friendly format + Python bindings
crazydoc
Read DNA sequences from colourful Microsoft Word documents
d-tailor
DnaChisel
:pencil2: A versatile DNA sequence optimizer
hybracter
Automated long-read first bacterial genome assembly pipeline implemented in Snakemake using Snaketool.
Kaptive-Web
Kaptive web interface
pan-genome-visualization
Visualization of the pan-genome output by panX
python-sepaxml
SEPA Direct Debit XML generation in python
simone-pignotti's Repositories
simone-pignotti/bactopia
A flexible pipeline for complete analysis of bacterial genomes
simone-pignotti/bioconda-recipes
Conda recipes for the bioconda channel.
simone-pignotti/codon-usage-tables
:bar_chart: Codon usage tables in code-friendly format + Python bindings
simone-pignotti/crazydoc
Read DNA sequences from colourful Microsoft Word documents
simone-pignotti/d-tailor
simone-pignotti/DnaChisel
:pencil2: A versatile DNA sequence optimizer
simone-pignotti/hybracter
Automated long-read first bacterial genome assembly pipeline implemented in Snakemake using Snaketool.
simone-pignotti/Kaptive-Web
Kaptive web interface
simone-pignotti/pan-genome-visualization
Visualization of the pan-genome output by panX
simone-pignotti/python-sepaxml
SEPA Direct Debit XML generation in python
simone-pignotti/sktime
A scikit-learn compatible Python toolbox for learning with time series data