sims-lab

Pinned Repositories

CapCruncher
Analysis tool for NG-Capture-C, Tri-C and Tiled-C data
Language:Python6 2 383
ccb-wiki
Wiki documenting the CBRG cluster setup
Language:Python2 5 120
cloneseq
Find barcodes in single cell RNASeq data
Language:Python00
FlyThirst
Park, Croset et al. single-cell analysis
2 4 00
pipeline_rnaseq_hisat2
A pipeline for processing RNA-seq data using cgatcore and HISAT2.
Language:Python01
pipeline_template
Template of pipeline using cgatcore
Language:Python0 3 20
scenic
Pipeline to run SCENIC analysis (pySCENIC)
Language:Python1 3 31
simulated_ngs_datasets
Simulated next-generation sequencing datasets
Language:R0 2 00

sims-lab's Repositories

sims-lab/CapCruncher
Analysis tool for NG-Capture-C, Tri-C and Tiled-C data
Language:Python6 2 383
sims-lab/ccb-wiki
Wiki documenting the CBRG cluster setup
Language:Python2 5 120
sims-lab/FlyThirst
Park, Croset et al. single-cell analysis
2 4 00
sims-lab/scenic
Pipeline to run SCENIC analysis (pySCENIC)
Language:Python1 3 31
sims-lab/cloneseq
Find barcodes in single cell RNASeq data
Language:Python00
sims-lab/pipeline_rnaseq_hisat2
A pipeline for processing RNA-seq data using cgatcore and HISAT2.
Language:Python01
sims-lab/pipeline_template
Template of pipeline using cgatcore
Language:Python0 3 20
sims-lab/simulated_ngs_datasets
Simulated next-generation sequencing datasets
Language:R0 2 00