Unable to install CellSNP-Lite from conda
Closed this issue · 1 comments
aseyedia commented
Hello,
I would like to install this package for use with NumBat, but unfortunately, I am having trouble doing so:
(base) [seyediana@reslnvvhpc041 ~]$ conda config --add channels bioconda
Warning: 'bioconda' already in 'channels' list, moving to the top
(base) [seyediana@reslnvvhpc041 ~]$ conda config --add channels conda-forge
Warning: 'conda-forge' already in 'channels' list, moving to the top
...
(base) [seyediana@c-3-13 ~]$ conda install cellsnp-lite
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): done
Solving environment: \
Conda has been solving environments for about 30 minutes now. I may try to install from source but please let me know if the error is on my end at all.
Thank you,
Arta
aseyedia commented
Never mind, I just realized that NumBat has a Docker container, so I no longer need to install its dependencies.