genetic-variants
There are 23 repositories under genetic-variants topic.
brentp/echtvar
using all the bits for echt rapid variant annotation and filtering
single-cell-genetics/cellsnp-lite
Efficient genotyping bi-allelic SNPs on single cells
single-cell-genetics/cellSNP
Pileup biallelic SNPs from single-cell and bulk RNA-seq data
AlexiaJM/LEGIT
An R package for the Latent Environmental & Genetic InTeraction (LEGIT) model
WeirauchLab/RELI
Regulatory Element Locus Intersection (RELI) Analysis
rezacsedu/Convolutional-embedded-networks
Convolutional Embedded Networks for Population Scale Clustering and Bio-ancestry Inferencing
tkonopka/GeneticThesaurus
Thesaurus for genetic variants
zeyang-shen/maggie
Bioinformatic approach to identify functional transcription factor binding motifs
alexhaislip/Oden_Biohacking
At The ODIN, we believe the future is going to be dominated by genetic engineering and consumer genetic design will be a big part of that. We are making that happen by creating kits and tools that allow anyone to make unique and usable organisms at home or in a lab or anywhere.
mframpton/transplot
The transplot package can be used to make multi-track plots of Next Generation Sequencing (NGS) data for gene transcripts, namely for depth of coverage and for the distribution of variants and protein domains.
StatBiomed/SNPmanifold
Manifold learning for single-cell single-nucleotide genetic variations
tAndreani/RNAseQTL
Collection of scripts to map eQTL with RNAseq Data and Genotype by Sequencing
claramoreau9/NeuropsychiatricCNVs_Connectivity
The general impact of haploinsufficiency on brain connectivity underlies the pleiotropic effect of neuropsychiatric CNVs
cx0/llm-for-clinical-variants
Data repository for NeurIPS 2022 LMRL workshop paper.
shobeirimajid/GenoPartake
Decentralized data market for GenoPharmatic information
NavpreetDevpuri/DNAc
DNAc is a programming language for DNAs.
comorbidity/medgen-umls
NCBI Medical Genetics, UMLS Unified Medical Language System Concepts and PubMed linked citations
dcchang/gene-variant-extractor
Extracting gene variants from supplemental data files of human genomics research articles.
gitikabhardwaj/Genomic-Data-Exploration-Visualizing-Genetic-Variants-and-Allelic-Imbalance
Advanced bioinformatics analysis of RNA sequencing data and genomic databases using R. Explore allelic imbalances, SNP variants, and phylogenetic trees to uncover genetic insights and visualize complex data interactions.
Raisa-NN/BINF-5354
Final Project - Post Genomic Analysis