Pinned Repositories
alignDB
Analyze the relationship between indels and substitutions in genomes
alt-splice
alternative splicing detection based on RNA-seq datasets
App-Fasops
Operating blocked fasta files
Bio-EUtilities
Low-level OO Perl interface for NCBI's eutils
book
ega
Easy Genome Aligner
EGA-tutorial
This is a detailed introduction for EGA users to get a quick start.
egavm
Vagrant boxes for EGA.
egaz
Full UCSC multiple genome alignments procedure
faops
Operate fasta files
siyue1226's Repositories
siyue1226/IsoSeq_SA3nUP
Documentation and Developers Code Base for Iso-Seq SMRTAnalysis 3.x and beyond
siyue1226/alt-splice
alternative splicing detection based on RNA-seq datasets
siyue1226/alignDB
Analyze the relationship between indels and substitutions in genomes
siyue1226/Widespread-natural-variation-of-DNA-methylation-within-angiosperms
Data and scripts for Widespread natural variation of DNA methylation within angiosperms
siyue1226/ega
Easy Genome Aligner
siyue1226/try
have a try
siyue1226/fig_table
Create figs and tables from excel files. Mainly works on Windows.
siyue1226/book
siyue1226/EGA-tutorial
This is a detailed introduction for EGA users to get a quick start.
siyue1226/siyue1226.github.io
siyue1226/withncbi
Batch operation according to NCBI taxonomy database.
siyue1226/egavm
Vagrant boxes for EGA.
siyue1226/rnaseq_tutorial
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
siyue1226/Phylogeny-determined-by-domain
it's a task to explore
siyue1226/App-Fasops
Operating blocked fasta files
siyue1226/plenv
Perl binary manager
siyue1226/faops
Operate fasta files
siyue1226/egaz
Full UCSC multiple genome alignments procedure
siyue1226/ZTPG
A software Package to Assembly ring-shaped genome
siyue1226/Bio-EUtilities
Low-level OO Perl interface for NCBI's eutils
siyue1226/Teaching
Code and files used in teaching and training courses.