skiptoniam
I'm a biostatistican @csiro working on the development and implementation of statistical methods to facilitate biodiversity risk assessments.
CSIROHobart, Australia
Pinned Repositories
artists
Colour palettes based on famous artwork
bbgdm
bbgdm: Assess uncertainty in Generalised Dissimilarity Models via a Bayesian bootstrap
ecomix
ecomix is a package to implement model based species level (Species Archetype Models) or site level (Regions of Common Profile) grouping of community data.
geostuff
My R package for using gdal and ocm libraries in R. It's a moving feast.
msodm_code
Code used to build multi-species occupancy detection models in JAGS
nbglm
A version of a negative binomial glm - handy for ecomix package and other uses
ppmData
quasi-random quadrature scheme generation for Poisson point process modelling
ppmFit
A package to fit ppms using the ppmData package and objects - potentially merge down the track.
rzonation
run zonation from r
steps
steps: Spatially- and Temporally- Explicit Population Simulator
skiptoniam's Repositories
skiptoniam/ecomix
ecomix is a package to implement model based species level (Species Archetype Models) or site level (Regions of Common Profile) grouping of community data.
skiptoniam/ppmData
quasi-random quadrature scheme generation for Poisson point process modelling
skiptoniam/geostuff
My R package for using gdal and ocm libraries in R. It's a moving feast.
skiptoniam/ppmFit
A package to fit ppms using the ppmData package and objects - potentially merge down the track.
skiptoniam/rzonation
run zonation from r
skiptoniam/nbglm
A version of a negative binomial glm - handy for ecomix package and other uses
skiptoniam/Analysis-Sims-MarineParks
skiptoniam/aus-ppms
Biodiversity models & predictions (SDMs) using PPMs for Australia under land use change
skiptoniam/CesarCloud
Automation of creating and configuring AWS instances
skiptoniam/CTMCdive
R package to fit continuous-time Markov chain to dive data
skiptoniam/ecomix.dev
Development of new code for ecomix package
skiptoniam/elasticluster
Create clusters of VMs on the cloud and configure them with Ansible.
skiptoniam/fesomtools
Post-processing Python tools for FESOM
skiptoniam/flutes
Fractional Land Use Transitions in Ecological Systems
skiptoniam/greta
simple and scalable statistical modelling in R
skiptoniam/HMSC
skiptoniam/Jeffs
Qualitative modelling in R
skiptoniam/landshark
Large-scale spatial inference with Tensorflow.
skiptoniam/landuseHMM
Developmental repo for a landuse hidden markov model
skiptoniam/lucode_doubleblindpr
skiptoniam/nesp-2.1
skiptoniam/nesp-2.3_habitat-data-example
skiptoniam/ppmlasso
:exclamation: This is a read-only mirror of the CRAN R package repository. ppmlasso — Point Process Models with LASSO Penalties
skiptoniam/regSSP_fraclu
regional SSP analysis using fractional landuse model adapted from https://github.com/kapitzas/ch2_landusemodel
skiptoniam/rfst
skiptoniam/scampr
Spatially Correlated, Approximate Modelling of Point patterns in R
skiptoniam/skiptoniam
skiptoniam/skiptoniam.github.io
This is my research web page
skiptoniam/terriajs
A library for building rich, web-based geospatial data explorers.
skiptoniam/test
test repo for tutorial purposes