skose82
Currently working in cancer and microbial genomics with a focus on immunology, and multi-omics techniques.
Pinned Repositories
ViromeFlowX
bracken_plot
A Shiny app for taxonomic abundance visualization
genomad
geNomad: Identification of mobile genetic elements
viroprofiler
A containerized bioinformatics pipeline for viral metagenomic data analysis
Bracken
Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.
phyloseq
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
jukebox
Docker_and_VirtualBox_Image_HowTo
Docker_Image
pygames