slagtermaarten
PhD student working on computational/bioinformatics problems in tumor immunology at the Schumacher and Wessels labs, Netherlands Cancer Institute
Amsterdam, the Netherlands
Pinned Repositories
cyto_inference
Analyses for a manuscript by Hoekstra & Slagter et al. involving the use of transcriptomic read-outs to infer the spreading of cytokines through the tumor microenvironment
DISTINCT
Probabilistic label transfer from bulk to single cell RNASeq datasets using TRANSACT data integration
dotfiles
Fork and edit from thoughtbot/dotfiles
genesets
A repo of genesets and R functionality to read them
hashtagassignment
knitr
A general-purpose tool for dynamic report generation in R
LOHHLA
Fork of https://bitbucket.org/mcgranahanlab/lohhla
maartenutils
General utilities for R development
quickMHC
Cache and lookup antigen predictions
TONIC
Analyses for the TONIC trial lead by Marleen Kok at the Netherlands Cancer Institute
slagtermaarten's Repositories
slagtermaarten/knitr
A general-purpose tool for dynamic report generation in R
slagtermaarten/bioinf_VU_2011
Bioinformatics Assignments VU 2011
slagtermaarten/C-R_projectinit
Directory template to start working on a simulation study implemented in C and data processed in R
slagtermaarten/essentials
essentials
slagtermaarten/Gibthon
Gibthon Construct Designer - an interactive design tool for primers for use in the Gibson Assembly method.
slagtermaarten/glmnet
R package glmnet for estimating lasso and elastic net
slagtermaarten/LaTeX-Box
Lightweight Toolbox for LaTeX - New Official repository
slagtermaarten/MDL2Latex
Converts Stochpy MDL model descriptions to LaTeX
slagtermaarten/mmatemplate
Mathematica-based project template
slagtermaarten/pelican-themes
Themes for pelican
slagtermaarten/pydoc.vim
pydoc integration for the best text editor on earth
slagtermaarten/snipmate-snippets
vim-snipmate default snippets
slagtermaarten/ultisnips
Official Mirror of UltiSnips trunk on LaunchPad. Send pull requests to SirVer/ultisnips!