slobentanzer

Pinned Repositories

biochatter
Backend library for conversational AI in biomedicine
Language:Jupyter Notebook74 3 14328
biochatter-light
The light frontend for BioChatter, in pure Python
Language:Python50 4 3411
biochatter-paper
The Manubot repository for writing the BioChatter paper
Language:HTML1 1 06
biocypher
A unifying framework for biomedical research knowledge graphs
Language:Python228 9 33031
pole
Demo data repository (crime statistics)
Language:Python4 1 23
190917_tRF_RNA_binding
Language:R0 2 00
ask-my-pdf
Question answering system for PDF files
Language:Python0 1 00
awesome-compbio-chatgpt
An awesome repository of community-curated applications of ChatGPT and other LLMs im computational biology
0 0 00
beaker
WSGI middleware for sessions and caching
Language:Python0 1 00
integrative-transcriptomics
Integrative transcriptomics reveals sexually dimorphic control of the cholinergic/neurokine interface in schizophrenia and bipolar disorder
Language:R2 2 02

slobentanzer's Repositories

slobentanzer/integrative-transcriptomics
Integrative transcriptomics reveals sexually dimorphic control of the cholinergic/neurokine interface in schizophrenia and bipolar disorder
Language:R2 2 02
slobentanzer/ask-my-pdf
Question answering system for PDF files
Language:Python0 1 00
slobentanzer/awesome-compbio-chatgpt
An awesome repository of community-curated applications of ChatGPT and other LLMs im computational biology
0 0 00
slobentanzer/beaker
WSGI middleware for sessions and caching
Language:Python0 1 00
slobentanzer/cholinergic-neurokine
Language:JavaScript0 1 00
slobentanzer/decoupler-py
Python package to infer biological activities from omics data using a collection of methods.
Language:Python0 1 00
slobentanzer/igvf-catalog
Catalog API for the IGVF project
Language:TypeScript0 1 00
slobentanzer/biochatter
Backend library for conversational AI in biomedicine
Language:Python0 0
slobentanzer/BioHackEU24_preprint
Language:TeX0 0
slobentanzer/causality_perspective_2023
Language:HTML1 01
slobentanzer/hugo-theme-hello-friend-ng
Pretty basic theme for Hugo that covers all of the essentials. All you have to do is start typing!
Language:HTML0 0
slobentanzer/mirDIP-adapter
Language:Python2 0
slobentanzer/miRNA-workflow
Language:Shell2 0
slobentanzer/Monarch-BioCypher
Language:Python1 0
slobentanzer/ncrna-stroke
Language:JavaScript2 0
slobentanzer/NetworkModeling_course_2022
Language:R1 0
slobentanzer/obook
OBO Organized Knowledge: Training materials for becoming an OBO engineer
Language:Makefile1 0
slobentanzer/opinion-iron-rule
Language:HTML1 0
slobentanzer/pymilvus
Python SDK for Milvus.
Language:Python0 0
slobentanzer/pypath
Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotations and intercellular communication roles.
Language:Python0 0
slobentanzer/PySyft
Data science on data without acquiring a copy
Language:Jupyter Notebook1 0
slobentanzer/Reproducibility_HD2021-22
Language:Jupyter Notebook2 0
slobentanzer/reproduciblity
Base Version of the Seminar "Reproducibility in Biomedical Science"
Language:Jupyter Notebook2 0
slobentanzer/research-software-ecosystem.github.io
Research Software Ecosystem
slobentanzer/scanpy
Single-cell analysis in Python. Scales to >1M cells.
Language:Python0 0
slobentanzer/sctk
Language:Python1 0
slobentanzer/slobentanzer
2 0
slobentanzer/slobentanzer.github.io
personal github.io repository
Language:HTML2 0
slobentanzer/snakemake-workshop
Language:Python1 0
slobentanzer/stroke-trf
Language:HTML2 1