Pinned Repositories
AlleleAnalyzer
A software tool for personalized and allele-specific CRISPR editing.
metagenomics_pipeline_with_sciluigi
Trying out Luigi/SciLuigi to hopefully write better pipelines, replacing clunky shell scripts
Mouse_IBD_2017_paper_supporting_code
Supporting code for https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5585689/
optimize_over_tree
A mixed integer programming solution to the maximum phylogenetic diversity problem
search_16S_py
A simple python implementation of the 16S finding procedure described in https://doi.org/10.1101/124131
slyalina's Repositories
slyalina/Mouse_IBD_2017_paper_supporting_code
Supporting code for https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5585689/
slyalina/metagenomics_pipeline_with_sciluigi
Trying out Luigi/SciLuigi to hopefully write better pipelines, replacing clunky shell scripts
slyalina/optimize_over_tree
A mixed integer programming solution to the maximum phylogenetic diversity problem
slyalina/search_16S_py
A simple python implementation of the 16S finding procedure described in https://doi.org/10.1101/124131