LocalFold is a modification of the RNAplfold local folding algorithm. LocalFold only considers base-pairs centred within a window such that (i,j) are not located within the first and last positions of the windows.
Latest Release: LocalFold 1.0
LocalFold runs on recent Linux systems.
A recent installation of the Vienna Package Vienna RNA package is required.
Feel free to contribute to this project by wirting Issues with feature requests or bug reports.
If you use LocalFold, please cite our article:
doi: 10.1093/nar/gks181