smdb21

mzIdentML

Repository for mzIdentML and the corresponding examples

jmzReader

Fork of jmzReader library originally developed by PRIDE team

ProteinClusterQuant

Protein Cluster Quant is a Java software for the analysis of complex proteomics samples (quantitative or not). It helps to reduce the redundancy of the peptide-to-protein relationship and to visualize the results in a bipartite network (Cytoscape).

CensusTMT2MSstatsTMT

Converter from Census TMT output file to the input of MSstatsTMT

futmondo

java-miape-api

Java API for the extraction and management of MIAPE documents from standard proteomics data files

jmzReader

Fork of jmzReader library originally developed by PRIDE team

nucleome

PACOM

PACOM (Proteomics Assay COMparator) is a Java stand alone tool for visualize and compare large proteomics datasets

pride-mod

PRIDE-Mod is a Java API to handle different modifications such as UNIMOD or PSI-MOD.

smdb21/PACOM

PACOM (Proteomics Assay COMparator) is a Java stand alone tool for visualize and compare large proteomics datasets

smdb21/CensusTMT2MSstatsTMT

Converter from Census TMT output file to the input of MSstatsTMT

smdb21/futmondo

smdb21/java-miape-api

Java API for the extraction and management of MIAPE documents from standard proteomics data files

smdb21/jmzReader

Fork of jmzReader library originally developed by PRIDE team

smdb21/nucleome

smdb21/pride-mod

PRIDE-Mod is a Java API to handle different modifications such as UNIMOD or PSI-MOD.