Pinned Repositories
irg2_conversion
conversion scripts for IRG2 labs from X - > NWB
NHP_protocols
protocols for recordings
AdEx-Neural-ODE
AdEx IF single neuron model solved using neural ODEs
ichiyama_2022_code
ni_dynamicclamp
Dynamic Clamp interface for brian2 <-> NI daq systems
pyCEDFS
A very WIP python module to allow reading and import of Ced File System (CFS) electrophysiology files generated by the signal software suit
pypatchOTDA
sNMO
sNMO : single neuron model optimzier (SNMO)
smestern's Repositories
smestern/pyCEDFS
A very WIP python module to allow reading and import of Ced File System (CFS) electrophysiology files generated by the signal software suit
smestern/pypatchOTDA
smestern/AdEx-Neural-ODE
AdEx IF single neuron model solved using neural ODEs
smestern/ichiyama_2022_code
smestern/ni_dynamicclamp
Dynamic Clamp interface for brian2 <-> NI daq systems
smestern/pyAPisolation
Feature Extraction and Other tools for Patch-Clamp electrophysiology data
smestern/sNMO
sNMO : single neuron model optimzier (SNMO)
smestern/abfanalysiswebdemo
smestern/clustering-stability
Clustering stability based on https://arxiv.org/pdf/physics/0005046
smestern/crh_model_2024
smestern/csv2hdf
Simple working script to convert CSV files to HDF files
smestern/davis2021ncomms
smestern/drcme
Dimensionality-reduction and classification for morphology and electrophysiology
smestern/eskuebler.github.io
JMT Primate Cell Type Database
smestern/example-abf-files
example abf files
smestern/ipfx
smestern/nwb_hackathons
Repository for collecting materials from nwb hackathons
smestern/ot_da_matlab
Optimal Transport based Domain Adaptation in Matlab
smestern/patchotda
smestern/PCCA_Notebooks
smestern/PCCA_Notebooks_tutorials
smestern/plugin-template
Template for creating custom RTXI plugins
smestern/pytorch-eventprop
A PyTorch implementation of EventProp [https://arxiv.org/abs/2009.08378], a method to train Spiking Neural Networks
smestern/rehack-book
An example jupyter book
smestern/smestern
Config files for my GitHub profile.
smestern/stdp-mnist-brian2
Brian 2 version of Paper "Unsupervised Learning of digit recognition using STDP"
smestern/tkABF_Explorer
simple python tkinter gui for viewing and semi automated analysis of ABF physiology files