snardeli

Researcher @ Umeå Plant Science Center - Sweden.

UPSCUmeå

Pinned Repositories

chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
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datasharing
The Leek group guide to data sharing
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github-slideshow
A robot powered training repository :robot:
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Meena_et_al_2024
About Supplementary code for the manuscript: "Genes hosting antisense transcripts are stress responsive and govern the cold acclimation in Arabidopsis thaliana"
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Nardeli_et_al_2023
Analysis and documents relative to the Nardeli et al., 2023 manuscript.
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PreprocessingJournalClub
HTS preprocessing journal club
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project-template
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RNA-Seq-workflow-Differential-Expression
This is an adaptation of Charlotte Soneson's RNA-Seq teaching material, originally given at the EBI in April 2019
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scraps
Single-cell RNA Processing Software
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statements
Successful Job Applications and Grants
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snardeli/chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
Language:Nextflow0 0 00
snardeli/datasharing
The Leek group guide to data sharing
0 1 00
snardeli/github-slideshow
A robot powered training repository :robot:
Language:HTML0 1 10
snardeli/Meena_et_al_2024
About Supplementary code for the manuscript: "Genes hosting antisense transcripts are stress responsive and govern the cold acclimation in Arabidopsis thaliana"
0 1 01
snardeli/PreprocessingJournalClub
HTS preprocessing journal club
Language:JavaScript0 0 00
snardeli/project-template
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snardeli/RNA-Seq-workflow-Differential-Expression
This is an adaptation of Charlotte Soneson's RNA-Seq teaching material, originally given at the EBI in April 2019
Language:HTML0 0 00
snardeli/scraps
Single-cell RNA Processing Software
Language:Python00
snardeli/statements
Successful Job Applications and Grants
0 0 00
snardeli/test_repo_baltimore
This is a test repo for R Ladies Baltimore
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snardeli/snardeli.github.io
sarah.nardeli@slu.se
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snardeli/wigglescout
Explore and visualize genomics bigWig data.
snardeli/workshop-epigenomics-RTDs
workshop website on readthedocs
snardeli/workshop-reproducible-research
NBIS/ELIXIR course: Tools for Reproducible Research
snardeli/Zacharaki-et-al-2024
Supplementary code for the manuscript: "Convergent antisense transcription prime plant AAAP transporter genes to be cold responsive".