Pinned Repositories
4OSS-lesson
afplot
Plot allele frequencies in VCF files
bioconda-recipes
Conda recipes for the bioconda channel.
bioconda-utils
Utilities for building and managing bioconda recipes
bioconda.github.io
Bioconda is a distribution of bioinformatics software realized as a channel for the versatile package manager Conda.
droombot
Discord Bot for generating images from text prompts
fastq-count
Simple fastq read and base counter in Rust
fastqube
Binary representation of fastq files
image-date-organizer
Import and organize images by EXIF/XMP date
sndrtj's Repositories
sndrtj/afplot
Plot allele frequencies in VCF files
sndrtj/droombot
Discord Bot for generating images from text prompts
sndrtj/fastq-count
Simple fastq read and base counter in Rust
sndrtj/fastqube
Binary representation of fastq files
sndrtj/image-date-organizer
Import and organize images by EXIF/XMP date
sndrtj/4OSS-lesson
sndrtj/bioconda-recipes
Conda recipes for the bioconda channel.
sndrtj/bioconda-utils
Utilities for building and managing bioconda recipes
sndrtj/bioconda.github.io
Bioconda is a distribution of bioinformatics software realized as a channel for the versatile package manager Conda.
sndrtj/cyvcf2
cython + htslib == fast VCF and BCF processing
sndrtj/folding-at-home-docker
Unofficial Folding@Home Docker Image
sndrtj/fuzzyset
A simple fuzzy matching set for python strings
sndrtj/gvcf2bed
sndrtj/manta
Structural variant and indel caller for mapped sequencing data
sndrtj/multi-package-containers
Testing building mulled containers for multi-requirement tools.
sndrtj/peddy
genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF
sndrtj/pyrefflat
A refFlat parser in pure python
sndrtj/seti_at_home_container
Docker container to run seti@home.
sndrtj/stouffbed
sndrtj/varda
A database for genomic variation frequencies
sndrtj/weather-notebooks
sndrtj/wisestork
Within-sample CNV calling
sndrtj/workflows
Bioinformatics curated workflows that use Biocontainers tools