How can we use Signac processed data instead of ArchR object?

Question

How can we use Signac processed data instead of ArchR object?

Closed this issue 6 months ago · 2 comments

Hello dev team,

I would like to try out your new tool on my multiomics (scRNA&scATAC-seq) dataset. I processed it with Seurat and Signac. I dont have ArchR object. Is there a way to use Signac processed scATAC-seq data as an input ?

Thanks

Answer 1 · 2024-03-25T15:19:17.000Z

Hi, SCARlink only supports ArchR objects right now. We will add support for other object formats in the future but we don't have a timeline for it at the moment.

Answer 2 · 2024-04-22T07:17:18.000Z

Please I'm interested in the same, thanks