Pinned Repositories
scenicplus
SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.
cicero-release
ArchR-tutorial-on-sample-dataset-
First time using ArchR toolkit with their sample dataset.
cicero_tutorial
DL_model_happy_vs_sad_picture_classification
DL_model_potato_classification
This model is created by following the tutorial https://youtu.be/dGtDTjYs3xc
CellOracle
This is the alpha version of the CellOracle package
SCARlink
signac
R toolkit for the analysis of single-cell chromatin data
gimmemotifs
Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed installation instructions and usage examples.
momur's Repositories
momur/ArchR-tutorial-on-sample-dataset-
First time using ArchR toolkit with their sample dataset.
momur/cicero_tutorial
momur/DL_model_happy_vs_sad_picture_classification
momur/DL_model_potato_classification
This model is created by following the tutorial https://youtu.be/dGtDTjYs3xc