/Pipeliner

An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.

Primary LanguagePython

Welcome to Pipeliner - an open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.

Pipeliner provides access to a set of best-practices NGS pipelines developed, tested, and benchmarked by experts at CCBR and NCBR. This wiki is the main source of documentation for users and developers working with or contributing to Pipeliner. If you are unfamiliar with Pipeliner or this is the first time hearing about this project, please check out the links below.

Quick Navigation

Getting Started Project & Community FAQs Pipeline Documentation
Introducing Pipeliner, prerequisites and how to get started About our community, how to contribute and make feature requests Frequently asked questions and solutions to common problems Detailed technical documentation for users and developers about each of our pipelines

Questions or need help?

Please check out our FAQ or contact page for different ways of getting in touch with the team.