The 'dupsRemoved.bed' files vs the '_allFrags.bed' files have different fragsize distributions. Why??
allFrags appears correct.
aBrC-100Wing-30m-HiCa-CnR-Pel_dm3_trim_q5_dupsRemoved_allFrags.bed
aBrC-100Wing-30m-HiCa-CnR-Pel_dm3_trim_q5_dupsRemoved.bed