Make dashboard-style summary plot for each sample
snystrom opened this issue · 2 comments
snystrom commented
Include:
- Fragment size distributions
- # aligned
- # trimmed
- # align to each genome (fastq screen)
- # duplicates removed, etc. (# at each filtering step)
- FRiP scores for different peak calls
See additional list from #12
snystrom commented
Also repeat this for each metric type but split by all samples, so can browse individual report & aggregate stats between samples.
snystrom commented
- Fragsize plots inside/outside peaks
- Pearson correlations between replicates along sliding window & within peaks
- Rmd report summarizing outputs