Train and evaluate conditional generative adveserial networks to virtually stain stacks of brightfield images.
This project is powered by DeepTrack 2.0
Clone the repository using git clone https://github.com/softmatterlab/VirtualStaining
Requires python >= 3.6
Open a terminal and run pip install -r misc/requirements.txt
For use with a GPU, please refer to tensorflow
Requires Docker.
Open a terminal, move into VirtualStaining, and run docker build . -t VirtualStaining
Start the container by running docker run --name VirtualStaining -it VirtualStaining