Pinned Repositories
soh-i's Repositories
soh-i/cligb
cligb: Command line based genome browser for small RNA-seq data
soh-i/bam-reader-test
Bam reader for scala
soh-i/centroid_bpp
Show base-pair probability each base position from bppm file
soh-i/Ivy
Detection method for RNA editng sites based on high-throughput sequencing data
soh-i/soh-i.github.io
soh-i/App-Wataya
Notification command of a newly published book written by 綿矢りさ
soh-i/base-editing-prediction
soh-i/Benchmarking
Benchmarking test for RNA editing detection methods based on RNA-seq data
soh-i/DB4E-Cell-P
Database project for whole cell simulation in E. coli.
soh-i/DB4RESs
DB4RESs
soh-i/dots
soh-i/ecellp-ecocyc
Reconstruction network from ecocyc
soh-i/emacs.d
my configuration file of emacs
soh-i/Eryngii
Eryngii: Metadata aggregator for GEO/SRA
soh-i/guideseq
Analysis pipeline for the GUIDE-seq assay. For news, see:
soh-i/hoge
soh-i/jekyll-tipue-search
Full-text search in Jekyll with Tipue Search. Github Pages compatible. (This repository is archived. Issues are disabled. Pull requests will be ignored.)
soh-i/MBSJ2013_Figure
Generate figures used poster in MBSJ2013
soh-i/mod_gollum
my private wiki engine forked from github.com/gollum/gollum
soh-i/networkx
Official NetworkX source code repository.
soh-i/nuclearRNA
Calculate intron retention score by RNA-seq data extracted drosophila nuclear RNA
soh-i/pairwise-library-screen
Pairwise Library Screen code
soh-i/polyN_finder
soh-i/PrettyBioStrings
Pretty printer for nucleotide sequence in your console
soh-i/pyenv
Simple Python version management
soh-i/pyleup
samtools pileup format parser for python
soh-i/samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
soh-i/Thesis-grad
卒業論文
soh-i/UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
soh-i/yattecast
Podcastサイトをつくるためのテンプレート