sokratiag

University of ManchesterManchester

Pinned Repositories

cell2location
cell2location: High-throughput spatial mapping of cell types
Language:Python00
her2st
Her2 Breast Cancer Project
Language:Jupyter Notebook00
ImcSegmentationPipeline
A pixel classification based multiplexed image segmentation pipeline
Language:Jupyter Notebook00
ITHACA-FV
Language:C++00
ArchR
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
Language:R362127
cell2location
Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)
Language:Python29054
spatialdata
An open and interoperable data framework for spatial omics data
Language:Python19634
ITHACA-FV
Reduced order modelling techniques for OpenFOAM
Language:C++16095
SpatialInferCNV
Clone Calling from Visium Spatial Transcriptomics of Cancer samples
Language:HTML4810
spatialdata-plot
Static plotting for spatialdata
Language:Python2513

sokratiag's Repositories

sokratiag/ImcSegmentationPipeline
A pixel classification based multiplexed image segmentation pipeline
sokratiag/her2st
Her2 Breast Cancer Project
sokratiag/cell2location
cell2location: High-throughput spatial mapping of cell types
sokratiag/ITHACA-FV
Language:C++