Official code of the paper "DS6, Deformation-aware Semi-supervised Learning: Application to Small Vessel Segmentation with Noisy Training Data" (https://arxiv.org/abs/2006.10802) Recording of the live-stream of the talk at Stanford University: https://youtu.be/p1RrvlMMhOI
Docker container and pre-trained weights will soon be made available.
The name of this project "DS6" was selected as a tribute to Star Trek: Deep Space Nine (DS9). DS6 = Deformation-aware Segmentation, trained on 6 MR Volumes.
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If you use this approach in your research or use codes from this repository, please cite the following in your publications:
BibTeX entry:
@Article{chatterjee2022ds6,
AUTHOR = {Chatterjee, Soumick and Prabhu, Kartik and Pattadkal, Mahantesh and Bortsova, Gerda and Sarasaen, Chompunuch and Dubost, Florian and Mattern, Hendrik and de Bruijne, Marleen and Speck, Oliver and Nürnberger, Andreas},
TITLE = {DS6, Deformation-Aware Semi-Supervised Learning: Application to Small Vessel Segmentation with Noisy Training Data},
JOURNAL = {Journal of Imaging},
VOLUME = {8},
YEAR = {2022},
NUMBER = {10},
ARTICLE-NUMBER = {259},
URL = {https://www.mdpi.com/2313-433X/8/10/259},
ISSN = {2313-433X},
DOI = {10.3390/jimaging8100259}
}
Thank you so much for your support.