spvensko
Most of my work is available on my GitLab page: https://gitlab.com/spvensko
Holly Springs, NC
Pinned Repositories
HLAProfiler
lenstools
mhcnuggets
Public facing repository for the MHCnuggets method
neoantigen-vaccine-pipeline
Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines
NeoSplice
neosplice_test
raft
raft-test
A simple RAFT test
rtd-tutorial
SNAF
Splicing Neo Antigen Finder (SNAF) is an easy-to-use Python package to identify splicing-derived tumor neoantigens from RNA sequencing data, it further leverages both deep learning and hierarchical Bayesian models to prioritize certain candidates for experimental validation
spvensko's Repositories
spvensko/HLAProfiler
spvensko/lenstools
spvensko/mhcnuggets
Public facing repository for the MHCnuggets method
spvensko/neoantigen-vaccine-pipeline
Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines
spvensko/NeoSplice
spvensko/neosplice_test
spvensko/raft
spvensko/raft-test
A simple RAFT test
spvensko/rtd-tutorial
spvensko/SNAF
Splicing Neo Antigen Finder (SNAF) is an easy-to-use Python package to identify splicing-derived tumor neoantigens from RNA sequencing data, it further leverages both deep learning and hierarchical Bayesian models to prioritize certain candidates for experimental validation
spvensko/ultra
Long-read splice alignment with high accuracy