srp33

Pinned Repositories

ChatGPT_Bioinformatics
Data and code from "Many bioinformatics programming tasks can be automated with ChatGPT"
Language:HTML4 3 02
CodeBuddy
CodeBuddy: A programming assignment management system for short-form exercises
Language:Python12 5 2369
ExpressionAble
Transform, query, and merge tabular files with the expressionable Python module. This tool is used primarily for gene-expression data.
Language:HTML2 4 05
ML-Flex
Language:Java10 6 23
SCAN
Language:Python3 4 01
ShinyLearner
ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms
Language:HTML18 4 68
TCGA_RNASeq_Benchmark
Language:Shell3 3 00
TCGA_RNASeq_Clinical
Language:HTML60 13 139
TidyGEO
Language:HTML5 3 03
ToolJig
ToolJig: An app for building simplified Common Workflow Language tool and workflow descriptions
Language:HTML9 4 02

srp33's Repositories

srp33/ShinyLearner
ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms
Language:HTML18 4 68
srp33/CodeBuddy
CodeBuddy: A programming assignment management system for short-form exercises
Language:Python12 5 2369
srp33/ToolJig
ToolJig: An app for building simplified Common Workflow Language tool and workflow descriptions
Language:HTML9 4 02
srp33/TidyGEO
Language:HTML5 3 03
srp33/ChatGPT_Bioinformatics
Data and code from "Many bioinformatics programming tasks can be automated with ChatGPT"
Language:HTML4 3 02
srp33/f4
Python module to build and query Fast Fixed-width File Format (F4) files
Language:Python2 4 00
srp33/Geney
Geney: a web-based tool to make your data wishes come true!
Language:Python2 5 163
srp33/GEO_NLP
Language:Python1 3 01
srp33/GoodNomen
Good Nomen: A web-based tool for mapping biomedical data to reference terminologies
Language:R1 3 02
srp33/ShinyLearner_gpu
Language:HTML1 3 0
srp33/WishBuilder
Please visit this page for a description of this project:
Language:Python1 3 9310
srp33/bio_image_colorblindness
Evaluation of the use of colorblind-unfriendly images in biology-related journal articles
Language:R2 02
srp33/chorion_demo
Let's demonstrate how Docker containers can be used for storing and sharing data
Language:Shell3 0
srp33/colorblind_image_tester
This Web application enables biologists whether images are "friendly" to people with deuteranopia, the most common form of red/green colorblindness.
Language:JavaScript2 0
srp33/confounded
Language:TeX3 01
srp33/confounded_analysis
Language:R2 0
srp33/confounded_paper
Language:TeX2 0
srp33/course_resources
2 0
srp33/deconfounding_expression
Language:R
srp33/f4py
A Python package for the Fast Fixed-width File Format (F4)
Language:Python2 0
srp33/GEOfinder
Language:Python2 0
srp33/IllumiSCAN
Implementation of the Single Channel Array Normalization (SCAN) Method for Illumina BeadChip arrays
Language:R1 0
srp33/Phlash
Language:Vue2 3
srp33/Query_Tabular_Data
Language:Python2 0
srp33/r_cheat_sheets
srp33/ShinyLearner_Environment
Docker environment for the ShinyLearner app
Language:Shell3 0
srp33/ShinyLearner_Environment_gpu
Language:Dockerfile3 0
srp33/tabular_data_compression
Language:Shell2 0
srp33/Tabular_File_Benchmark
Language:Python3 01
srp33/WishBuilder-CLI-Environment
This builds the Docker image for WishBuilder-CLI so we don't have to reinstall components each time we modify our scripts
Language:Dockerfile3 0