Pinned Repositories
osiris
Omitting-States-Irrelevant-to-Return Importance Sampling estimator for off-policy evaluation
namedtensor
Named Tensor implementation for Torch
acsat
Automated Cell Segmentation by Adaptive Thresholding (ACSAT)
bioconda-recipes
Conda recipes for the bioconda channel.
CRISPResso2
Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
gantt-task-react
Gantt chart for React with Typescript
GSEApy
Gene Set Enrichment Analysis in Python
harvardnow
labplotlib
peglit
Automatically identify non-interfering nucleotide linkers between a pegRNA and 3' motif
sshen8's Repositories
sshen8/peglit
Automatically identify non-interfering nucleotide linkers between a pegRNA and 3' motif
sshen8/acsat
Automated Cell Segmentation by Adaptive Thresholding (ACSAT)
sshen8/bioconda-recipes
Conda recipes for the bioconda channel.
sshen8/CRISPResso2
Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
sshen8/gantt-task-react
Gantt chart for React with Typescript
sshen8/GSEApy
Gene Set Enrichment Analysis in Python
sshen8/harvardnow
sshen8/labplotlib
sshen8/MultiplexNanopore
sshen8/namedtensor
Named Tensor implementation for Torch
sshen8/scanpy
Single-cell analysis in Python. Scales to >1M cells.
sshen8/SHARE-seq-alignmentV2
Pipeline for demultiplexing and aligning both ATAC and RNA data generated in SHARE-seqV2
sshen8/UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets