sstadick
Rust, Bioinformatics I'm actually still doing a lot of $work, it's just all on GitLab. Don't judge my contribution map!
Bio-Rad LaboratoriesBoulder Colorado
Pinned Repositories
cargo-bundle-licenses
Generate a THIRDPARTY file with all licenses in a cargo project.
crabz
Like pigz, but rust
gzp
Multi-threaded Compression
hck
A sharp cut(1) clone.
nython
Build Python Extension Modules for Nim libraries.
perbase
Per-base per-nucleotide depth analysis
ponim
Nim + Python + Poetry = :)
ripline
Fast by-line reader from ripgrep
rumi
Rust UMI Directional Adjacency Deduplicator
rust-lapper
Rust implementation of a fast, easy, interval tree library nim-lapper
sstadick's Repositories
sstadick/hck
A sharp cut(1) clone.
sstadick/crabz
Like pigz, but rust
sstadick/gzp
Multi-threaded Compression
sstadick/perbase
Per-base per-nucleotide depth analysis
sstadick/cargo-bundle-licenses
Generate a THIRDPARTY file with all licenses in a cargo project.
sstadick/rust-lapper
Rust implementation of a fast, easy, interval tree library nim-lapper
sstadick/bam-builder
Wrapper over rust-htslib for building collections of BAM records for testing.
sstadick/bioinfo_benchmarks
Language benchmarks that are important for Bioinformatics scripting
sstadick/error_handling
Some examples of error handling in Rust
sstadick/aoc-2023
sstadick/aoc-lisp-rs
A Lisp to use for Advent of Code, written in Rust
sstadick/1kos
https://operating-system-in-1000-lines.vercel.app/en/
sstadick/aoc-2024
sstadick/aoc-c-2024
advent of code in c for 2024
sstadick/aoclisp
sstadick/cargo-ghdoc
View Rustdocs for PRs
sstadick/Complete-Striped-Smith-Waterman-Library
sstadick/igblast
sstadick/ir_utils
dump assembly and IR for mojo functions
sstadick/jball
Exploration of nfldata with Julia
sstadick/linecount-swift
sstadick/linux
Linux kernel source tree
sstadick/modular-community
A repo to hold community-submitted rattler-build recipes, to make community packages available via the modular-community prefix.dev channel
sstadick/mojo
The Mojo Programming Language
sstadick/mojo-demo
sstadick/monitor
This is not intended for real use, just part of a build-it-from-scratch excersise.
sstadick/NFLData.jl
Read up-to-date NFL data into Julia as a DataFrame.
sstadick/rust-vs-mojo-loop
sstadick/simplebed-rs
a simple bed file reader and writer that allows querying when an index is present
sstadick/SwiftIO
Rust IO, but in Swift