stasaki

19+ yrs in computational biology & multi-omics. Passionate about modeling & open-source. Focused on neurodegeneration, dementia, & aging.

Rush UniversityChicago

Pinned Repositories

Association_TEST
Language:R0 0 00
CINDERellA
Causal Inference Networks for Determining Expression Relationships Anthology
0 2 01
clei2block
Deep-neural protein translation
Language:HTML4 1 35
clipper
Language:Python0 1 00
DEcode
A prediction model for differential gene expression (DE) based on genome-wide regulatory interactions
Language:Jupyter Notebook25 3 39
DEcodeTree
Language:R00
Guitar
Language:R1 1 13
PentaMind
Language:Jupyter Notebook6 1 11

stasaki's Repositories

stasaki/DEcode
A prediction model for differential gene expression (DE) based on genome-wide regulatory interactions
Language:Jupyter Notebook25 3 39
stasaki/PentaMind
Language:Jupyter Notebook6 1 11
stasaki/clei2block
Deep-neural protein translation
Language:HTML4 1 35
stasaki/Guitar
Language:R1 1 13
stasaki/Association_TEST
Language:R0 0 00
stasaki/CINDERellA
Causal Inference Networks for Determining Expression Relationships Anthology
0 2 01
stasaki/clipper
Language:Python0 1 00
stasaki/DEcodeTree
Language:R00
stasaki/ggpubr
'ggplot2' Based Publication Ready Plots
Language:R00
stasaki/gmvault
gmail backup software
Language:Python0 0 00
stasaki/eCLIPseq-pipeline
Language:Python
stasaki/imputation_TOPMed_r3
Language:Shell
stasaki/ldsc
LD Score Regression (LDSC)
Language:Python0 0
stasaki/MeTPeak
Language:R0 0
stasaki/PopSV
Population-based detection of structural variation from High-Throughput Sequencing.
Language:R1 0
stasaki/PrediXcan
Code for the in-dev PrediXcan Project
Language:HTML
stasaki/SciVis
Language:R0 0
stasaki/SCORPIUS
Language:Python1 01
stasaki/share-blogdown
Language:HTML
stasaki/stasaki
My personal repository.
stasaki/stasaki.github.io
Language:HTML