sterding
Assistant Professor at Harvard Medical School; Director of Genomics and Bioinformatics Hub, Brigham and Women's Hospital
Harvard Medical SchoolBoston, MA
Pinned Repositories
amp-pd-workflows
Pipeline definitions used to construct AMP-PD data products
BRAINcode
Script and pipeline for BRAINcode project
circRNA
code for two circRNA projects
Correlation
correlate expression with histone modifications (and TFBS)
EXODUS
Code for the EXODUS paper
git_tutorial
One-hour online tutorial of git.
piRNA2
code for the pre-pachytene piRNA project
powerEQTL
R package for power analysis for eQTL study
SplicePlot2-1
Visualization toolkit for splicing QTL and circularization QTL
sterding's Repositories
sterding/BRAINcode
Script and pipeline for BRAINcode project
sterding/powerEQTL
R package for power analysis for eQTL study
sterding/circRNA
code for two circRNA projects
sterding/EXODUS
Code for the EXODUS paper
sterding/git_tutorial
One-hour online tutorial of git.
sterding/piRNA2
code for the pre-pachytene piRNA project
sterding/SplicePlot2-1
Visualization toolkit for splicing QTL and circularization QTL
sterding/amp-pd-workflows
Pipeline definitions used to construct AMP-PD data products
sterding/bam2x
extract information from bam (sequence alignment) files and generate tables for further analysis.
sterding/CircleCutter
Visualization toolkit for splicing QTL and circularization QTL
sterding/code_umass
backup code for Umass project
sterding/DL_computefest_2017
Harvard Computefest 2017 Deep Learning workshops
sterding/DNAseq
pipeline to process DNA sequencing data e.g. WES, WGS, and target sequencing
sterding/dockstore-tool-bamstats
A repo for the BAMStats command, used as the tutorial for Dockstore
sterding/donglab.org
Source code for Dong Lab website
sterding/ea-utils
Automatically exported from code.google.com/p/ea-utils
sterding/git-intro
Intro to git
sterding/gwSPIA
Improved signaling pathway impact analysis with gene weights
sterding/HD_ChIPseq
study the differential ChIPseq signal btw HD and controls
sterding/humanbraincode.org
code for humanbraincode.org
sterding/kent
UCSC Genome Browser source tree. Stable branch: "beta".
sterding/mel-ngs
ngs code for mel lab
sterding/PD5D
Repository for PD5D project, incl. snRNAseq and scATACseq
sterding/Pipeline-Standardization
sterding/smallRNA
source code related with small RNA
sterding/SplicePlot
Visualization toolkits for splicing QTL and circularization QTL
sterding/sterding.github.io
code for sterding.com
sterding/try_git
sterding/VennDiagram
:exclamation: This is a read-only mirror of the CRAN R package repository. VennDiagram — Generate High-Resolution Venn and Euler Plots
sterding/xjlib
xianjun_lib