Transcript Converter

Program to translate transcript coordinates to genomic coordinates.

Reads in a set of transcripts with CIGAR strings, and then converts a set of given coordinates supplied in the secondary query file.

$ go run main.go "tests/input1.txt" "tests/input2.txt
TR1	4	CHR1	7
TR2	0	CHR2	10
TR1	13	CHR1	23
TR2	10	CHR2	20

A Go implementation to a common Python bioinformatics practice problem.

References