stevenjwest
Neuroanatomist & histologist with interest in image processing. Interests include stereology, deconvolution, automated object processing & 3D object analysis.
University College LondonLondon, UK
Pinned Repositories
brainregister
Python package for elasitx-based registration of mouse brain images to the Allen CCFv3.
ConfocalDeconvolutionCLI
Run fluorescence image deconvolution via CLI.
High_Pass_Gaussian_Filter
High-Pass Gaussian Filter
iterativedeconv
Mirror of Parallel Iterative Deconvolution project
lasagna
3-D imaging visualisation through slicing
Multi_OTSU_Segmentation
An update to the Multi-OTSU Threshold plugin to directly segment the input image.
NisslClustering
Clustering nissl labelling in CNS
projectmanagr
A library for organising project documentation in R Markdown.
StereoMate
ImageJ Plugins for Knowledge Extraction from Immunofluorescence Confocal Image Stacks
stevenjwest
stevenjwest's Repositories
stevenjwest/brainregister
Python package for elasitx-based registration of mouse brain images to the Allen CCFv3.
stevenjwest/Multi_OTSU_Segmentation
An update to the Multi-OTSU Threshold plugin to directly segment the input image.
stevenjwest/projectmanagr
A library for organising project documentation in R Markdown.
stevenjwest/StereoMate
ImageJ Plugins for Knowledge Extraction from Immunofluorescence Confocal Image Stacks
stevenjwest/stevenjwest
stevenjwest/ConfocalDeconvolutionCLI
Run fluorescence image deconvolution via CLI.
stevenjwest/High_Pass_Gaussian_Filter
High-Pass Gaussian Filter
stevenjwest/iterativedeconv
Mirror of Parallel Iterative Deconvolution project
stevenjwest/lasagna
3-D imaging visualisation through slicing
stevenjwest/NisslClustering
Clustering nissl labelling in CNS
stevenjwest/OpenGL
My OpenGL projects.
stevenjwest/OSSRH-52858
to verify github account ownership with OSSRH
stevenjwest/test
test
stevenjwest/testpkg
Test Package for R Package creation