Pinned Repositories
algae.phylookup
Retrieve phylogeny from algaebase
algae.spellchecker
Spellcheck taxa names against accepted name file
AlgaeDNA
Comparing algae DNA taxonomy with morphology-based taxonomy from California stream algae samples
ASCI
ASCI-beta
R package for calculating ASCI scores
benthicindex
This repository will contain files pertaining to the development of a marine DNA benthic index
DBpull
GapAnalysis
genbank_map
Shiny Rmd dashboard to view and filter GenBank data
MMWG
Links for the California Molecular Methods Workgroup SOPs and feedback
stheroux's Repositories
stheroux/MMWG
Links for the California Molecular Methods Workgroup SOPs and feedback
stheroux/ASCI
stheroux/algae.phylookup
Retrieve phylogeny from algaebase
stheroux/algae.spellchecker
Spellcheck taxa names against accepted name file
stheroux/AlgaeDNA
Comparing algae DNA taxonomy with morphology-based taxonomy from California stream algae samples
stheroux/ASCI-beta
R package for calculating ASCI scores
stheroux/benthicindex
This repository will contain files pertaining to the development of a marine DNA benthic index
stheroux/DBpull
stheroux/GapAnalysis
stheroux/genbank_map
Shiny Rmd dashboard to view and filter GenBank data
stheroux/mASCI
Bioinformatic and computational scripts for developing the mASCI
stheroux/QIIME2
QIIME2 pipeline for generating ASVs and assigning taxonomy
stheroux/RafiMap
Interactive map for streams
stheroux/SCCWRP_Networks
Co-occurence networks on DNA data
stheroux/tahoe