/sttDB-server

Primary LanguageJavaGNU Affero General Public License v3.0AGPL-3.0

Build Status codebeat badge codecov

SttDB-server

Backend of the salmo-trutta database, a project between the Genetic and Biodiversity Research Group and GRIHO research group, University of Lleida(UdL).

Objective

The project objective is to construct, with the SttDB-client github project, a web page to visualize, compare and provide information about DNA sequences of the salmo-trutta specie.

Develop and contribute

You will need Spring, mongodb and maven. The master branch has the work in progress code, while the releases contain the stable features. A pull request must contain issue features/solved problems.

Contact

  • Joan Fibla (Owner) - email
  • Marta Oliva (Supervisor) - email
  • Marc Ribalta (Developer) - email
  • Roger Arqués (Developer) - email

Cites

SequenceServer blast tool: Priyam A, Woodcroft BJ, Rai V, Munagala A, Moghul I, Ter F, Gibbins MA, Moon H, Leonard G, Rumpf W & Wurm Y. 2015. Sequenceserver: A modern graphical user interface for custom BLAST databases. biorxiv doi: 10.1101/033142.