Pinned Repositories
bioperl-live
Core BioPerl 1.x code
blast2ape
geneUniverse
R functions for selecting control gene-sets
helmsman
highly-efficient & lightweight mutation signature matrix aggregation
intro-python
An iPython Notebook for a quick 'lecture style' workshop.
JunctionSeq
The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generation, high-throughput RNA-Seq experiments.
polyester
Bioconductor package "polyester", devel version. RNA-seq read simulator.
RNAsik-pipe
RNAsik - more than just a pipeline
sabre
sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
stu2's Repositories
stu2/bioperl-live
Core BioPerl 1.x code
stu2/blast2ape
stu2/geneUniverse
R functions for selecting control gene-sets
stu2/helmsman
highly-efficient & lightweight mutation signature matrix aggregation
stu2/intro-python
An iPython Notebook for a quick 'lecture style' workshop.
stu2/JunctionSeq
The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generation, high-throughput RNA-Seq experiments.
stu2/polyester
Bioconductor package "polyester", devel version. RNA-seq read simulator.
stu2/RNAsik-pipe
RNAsik - more than just a pipeline
stu2/sabre
stu2/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
stu2/superFreq
Analysis pipeline for cancer sequencing data
stu2/VEPvcf_parser