Pinned Repositories
Hashikawa-Hashikawa-2020
Analysis code related to, "Transcriptional and Spatial Resolution of Cell Types in the Mammalian Habenula"
Hashikawa-Hashikawa-2021
leccaetal2020
Lecca et al. Cell Reports 2020
McHenry-et-al.-Nature-Neuroscience
Otis-Namboodiri-et-al.-
analysis code developed and implemented in Otis, Namboodiri et al.
PC_opto_fMRI_analysis
Repository of ipython notebooks and associated code for data analysis implemented in the Decot, Namboodiri et al., manuscript
resendez-et-al-2018
Resendez_Nature_Protocols
Code repository for analysis routines detailed in the Resendez et al., 2016 Nature Protocols manuscript
Rossi-Basiri-et-al-2019
SIMLR_PY
Python Implementation of SIMLR for single-cell visualization and analysis
Stuber Lab @ the University of Washington's Repositories
stuberlab/Rossi-Basiri-et-al-2019
stuberlab/Resendez_Nature_Protocols
Code repository for analysis routines detailed in the Resendez et al., 2016 Nature Protocols manuscript
stuberlab/Hashikawa-Hashikawa-2020
Analysis code related to, "Transcriptional and Spatial Resolution of Cell Types in the Mammalian Habenula"
stuberlab/Hashikawa-Hashikawa-2021
stuberlab/leccaetal2020
Lecca et al. Cell Reports 2020
stuberlab/McHenry-et-al.-Nature-Neuroscience
stuberlab/Otis-Namboodiri-et-al.-
analysis code developed and implemented in Otis, Namboodiri et al.
stuberlab/PC_opto_fMRI_analysis
Repository of ipython notebooks and associated code for data analysis implemented in the Decot, Namboodiri et al., manuscript
stuberlab/SIMLR_PY
Python Implementation of SIMLR for single-cell visualization and analysis
stuberlab/resendez-et-al-2018
stuberlab/Ishii-Mating-completion
code for Ishii et al mating completion paper
stuberlab/Namboodiri-et-al.-2021
stuberlab/OHRBETS
An open-source ecosystem of hardware and software for head-fixed behavior associated with Gorden-Fennel et al.
stuberlab/optofMRI
stuberlab/Pauli-Chen-Basiri-et-al-2022
Single-Cell RNA Sequencing Analysis of the Parabrachial Nucleus from the labs of Dr. Richard Palmiter and Dr. Garret Stuber.
stuberlab/RodriguezRomaguera-Ung-Nomura-et-al-2019
Analysis used in work by Rodriguez-Romaguera, Ung, Nomura et al.
stuberlab/Rossi-et-al-2021