Pinned Repositories
CBASS84
analysis workflow and scripts for CBASS84 manuscript
cdi
Computational tools to understand bortezomib resistance.
evolution-of-syntrophy
Code and data related to analysis of genomics data
miner2
Mechanistic Inference of Node-Edge Relationships (MINER)
MSB-16-7058
Supporting files for manuscript Turkarslan et al., MSB-16-7058
network-portal-old
Network Portal related files
R-scripts
R script Files
regulon-vis
a set of visualizations for the halo bacteria regulon project
RNASeq-Analysis
Custom workflow for analysis of RNAseq data
single-cell-variant-calling
Scripts for single cell variant calling
sturkarslan's Repositories
sturkarslan/network-portal-old
Network Portal related files
sturkarslan/R-scripts
R script Files
sturkarslan/regulon-vis
a set of visualizations for the halo bacteria regulon project
sturkarslan/CBASS84
analysis workflow and scripts for CBASS84 manuscript
sturkarslan/cdi
Computational tools to understand bortezomib resistance.
sturkarslan/evolution-of-syntrophy
Code and data related to analysis of genomics data
sturkarslan/miner2
Mechanistic Inference of Node-Edge Relationships (MINER)
sturkarslan/MSB-16-7058
Supporting files for manuscript Turkarslan et al., MSB-16-7058
sturkarslan/RNASeq-Analysis
Custom workflow for analysis of RNAseq data
sturkarslan/single-cell-variant-calling
Scripts for single cell variant calling
sturkarslan/difference
Pipeline to call variant callers
sturkarslan/DuffyNGS
DuffyNGS – alignment and peak calling of ChIP-seq data
sturkarslan/DuffyTools
Custom R package for ChIP-seq peak filtering
sturkarslan/GbmMINER
sturkarslan/kallisto-tximport-deseq2
sturkarslan/miner3
miner written in python 3
sturkarslan/network_portal
A web-app for archiving and exploring gene-regulatory networks.
sturkarslan/portal_scripts
sturkarslan/rnaseq_starsalmon_slurm
RNA-Seq pipeline based on STAR Salmon for SLURM clusters
sturkarslan/sequence_analysis
Scripts related to NGS Data analysis
sturkarslan/Sequencing
Genomic sequence analysis tools
sturkarslan/single-cell-analysis
Scripts related to single cell analysis
sturkarslan/summer-internship-2022
sturkarslan/Test
sturkarslan/wp-mmapi
Wordpress plugin to consume mmapi