ninja build gives hdf5 error
albenstein opened this issue · 6 comments
Describe the bug
I tried to install SU2 from source on HPC system, but on ninja install step it gives error about hdf5 like on attached file.
(base) [root@headnode SU2_v7.5.1]# ./meson.py build -Denable-autodiff=true -Denable-directdiff=true -Dwith-mpi=enabled -Dwith-omp=true --prefix=/shared/apps/SU2/7.5.1/
(base) [root@headnode SU2_v7.5.1]# ./ninja -C build install
Bug report checklist
Please make sure that you have followed the checklist below, many common problems can be solved by:
- Consulting the build instructions (https://su2code.github.io/docs_v7/Build-SU2-Linux-MacOS/).
- Looking for similar problems on GitHub or CFD-Online (https://www.cfd-online.com/Forums/su2/).
- Updating to the newest version of SU2 (either develop, master, or the pre-built executables https://su2code.github.io/download.html).
Desktop (please complete the following information):
- OS: [e.g., Linux (Redhat 7.9)]
- C++ compiler and version: [e.g., g++ (GCC) 8.5.0]
- MPI implementation and version: [e.g., OpenMPI 4.0.3]
- SU2 Version: [e.g., v7.5.1]
Try going to externals/cgns/hdf5/meson.build and in line 19 replace 'cpp' with 'c'
@pcarruscag I changed the line and called mensa.py --reconfigure and then called ninja. It gives error again on ninja.txt
ninja.txt
I forgot to call miniconda eval bash.hook. I re called ninja and got this error:
ninja.txt
ok please try the same change in externals/cgns/meson.build
@pcarruscag It fixed installation issue.
Thank you.
Thanks for testing, we'll put the fix in the new version