sumiya-kuroda
Ph.D. student @UCL interested in functional connectomics
University College LondonLondon, UK
Pinned Repositories
CAVEclient
DAQViewer
A GUI to view DAQ signals
DeepCGH
A Python/TensorFlow implementation of DeepCGH, a framework for unsupervised deep learning-based computer-generated holography.
EMAnnotationSchemas
Repository to hold schemas for annotations of volumetric imaging data focused on EM
EMsegmentation-mito
EM segmentation of mitochondria from SNEMI3D data
glm-hmm
Code to run GLM-HMM on IBL and dmdm data using SWC's HPC
glmhmm
code to fit GLMs, HMMs, and GLM-HMMs (aka IO-HMMs)
rt_model_orsolic
ssm
Bayesian learning and inference for state space models
task-leaderboard
A leaderboard of highest score points of the psychophysical task
sumiya-kuroda's Repositories
sumiya-kuroda/EMsegmentation-mito
EM segmentation of mitochondria from SNEMI3D data
sumiya-kuroda/task-leaderboard
A leaderboard of highest score points of the psychophysical task
sumiya-kuroda/CAVEclient
sumiya-kuroda/EMAnnotationSchemas
Repository to hold schemas for annotations of volumetric imaging data focused on EM
sumiya-kuroda/glm-hmm
Code to run GLM-HMM on IBL and dmdm data using SWC's HPC
sumiya-kuroda/glmhmm
code to fit GLMs, HMMs, and GLM-HMMs (aka IO-HMMs)
sumiya-kuroda/rt_model_orsolic
sumiya-kuroda/ssm
Bayesian learning and inference for state space models
sumiya-kuroda/DAQViewer
A GUI to view DAQ signals
sumiya-kuroda/DeepCGH
A Python/TensorFlow implementation of DeepCGH, a framework for unsupervised deep learning-based computer-generated holography.
sumiya-kuroda/FuturePredictionProcessing
Introduction to PyTorch and ViT
sumiya-kuroda/HumanRAFT
RAFT-based optical flow estimation to detect moving humans
sumiya-kuroda/LastBlackBox
A course for brains interested in brains (not tools interested in tools)
sumiya-kuroda/LiteFlowNet2
A Lightweight Optical Flow CNN - Revisiting Data Fidelity and Regularization, TPAMI 2020
sumiya-kuroda/measurePSF
Measure PSF FWHM along different axes
sumiya-kuroda/npy-matlab
Experimental code to read/write NumPy .NPY files in MATLAB
sumiya-kuroda/oscmex
osc functionality for MATLAB using liblo
sumiya-kuroda/SLM-3dPointCloud
Python library for generating 3d point cloud holograms, with phase only spatial light modulators, in real time through a GPU implementation of 5 algorithms (Random superposition, Gerchberg-Saxton, weighted Gerchberg-Saxton, compressed sensing Gerchberg-Saxton, compressed sensing weighted Gerchberg-Saxton).
sumiya-kuroda/WarpedVisualStim
For displaying spherically corrected visual stimulus on a flat screen.
sumiya-kuroda/zebrafish
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