sunnyshang

sunnyshang's Stars

• ashishpatel26/LLM-Finetuning

  LLM Finetuning with peft

  Language:Jupyter Notebook2.2k612

• juls-dotcom/meta_analysis

  contains data collected during a meta-analysis neuro project

  Language:Jupyter Notebook52

• ConesaLab/paintomics4

  Language:JavaScript6

• TransBioInfoLab/pathwayMultiomics

  An R Package to Implement the Pathway-Based MiniMax Statistic for Multi-Omics Analysis

  Language:R52

• cumc/handson-tutorials

  Computer lab tutorials on statistical genetics and omics data science, contributed by various members from the community interested in developing training material for the next generation scientists

  Language:Jupyter Notebook610

• broadinstitute/tensorqtl

  Ultrafast GPU-enabled QTL mapper

  Language:Python16453

• jdidion/biotools

  A list of useful bioinformatics resources

  589169

• Mooler0410/LLMsPracticalGuide

  A curated list of practical guide resources of LLMs (LLMs Tree, Examples, Papers)

  9.5k738

• MerrimanLab/eQTL_project

  Development of a central data warehouse for eQTL and gene expression data. Including a SHINY interface to perform lookups and basic exploration.

  Language:R2

• xuzhenxing2018/amia

  41

• RenalHDRUK/AKI-phenotyping

  Algorithm, metadata and resources for AKI phenotyping in EHR data

  22

• statgen/Minimac4

  Language:C++5620

• OHDSI/NLPTools

  [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis

  Language:Java3214

• WGLab/phenolyzer

  phenotype-based prioritization of candidate genes for human diseases

  Language:Perl6433

• WGLab/EHR-Phenolyzer

  A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked gene list

  Language:Python3612

• melindacmills/IntroStatisticalGenetics

  GitHub site to accompany Textbook Introduction to Statistical Genetic Data Analysis

  Language:Shell278

• guigotoe/ExomeChip

  Language:R32

• statgenetics/statgen-courses

  Tutorials for statistical genetics short courses

  Language:Dockerfile3323

• OHDSI/CommonDataModel

  Definition and DDLs for the OMOP Common Data Model (CDM)

  Language:HTML906453

• josefin-werme/LAVA

  Language:R559

• josefin-werme/lava-scripts2021

  Language:R1

• bulik/ldsc

  LD Score Regression (LDSC)

  Language:Python655347

• UCLATALL/supernova

  An R package for teaching statistics from a modeling perspective

  Language:R646

• AWGL/DragenWGS

  A pipeline for analysing WGS data on the Dragen

  Language:Shell31

• barbagroup/AeroPython

  Classical Aerodynamics of potential flow using Python and Jupyter Notebooks

  Language:Jupyter Notebook937535

• CSSEGISandData/COVID-19

  Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE

  29.1k18.4k

• National-Clinical-Cohort-Collaborative/Phenotype_Data_Acquisition

  The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream

  Language:Python6135

• ieee8023/covid-chestxray-dataset

  We are building an open database of COVID-19 cases with chest X-ray or CT images.

  Language:Jupyter Notebook3k1.3k

• monarch-initiative/phenogrid

  The phenogrid widget

  Language:JavaScript1314

• semanticvectors/semanticvectors

  SemanticVectors creates semantic WordSpace models from free natural language text.

  Language:Java21862