/Few_Shot_Antibody_Design

Designing antibodies from partial antigen information

Primary LanguagePython

Few_Shot_Antibody_Design

SAbDab Data Download

python ./SAbDab_Dataloader/sabdab_downloader.py --summary_file './SAbDab_Dataloader/sabdab_summary.tsv' --output_path './SAbDab_Dataloader/SAbDab/' --original_pdb

SAbDab Data Pre-processing

Package Installation

pip install Bio
python ./SAbDab_Dataloader/download.py --summary './SAbDab_Dataloader/sabdab_summary.tsv' --fout './SAbDab_Dataloader/sab_dab_all.json' --type 'sabdab' --pdb_dir './SAbDab_Dataloader/SAbDab/'