Pinned Repositories
pedtricks
reboot of pedantics R package
2020_Soay_Recomb_GWAS
Scripts for updated GWAS of recombination rate in Soay sheep
2024_Sparrow_Recomb_GWAS
Code for the MBE article: The genetic architecture of recombination rates is polygenic and differs between the sexes in wild house sparrows (Passer domesticus)
fibonacci
Example R package generating Fibonacci Sequences And Plots
genedroppeR
R Package to conduct gene-drop analyses through pedigrees.
GENETICS_2015_185553
Code for manuscript "Conserved Genetic Architecture Underlying Individual Recombination Rate Variation in a Wild Population of Soay Sheep (Ovis aries)" http://www.genetics.org/content/203/1/583
ggpedigree
Draw nice pedigrees with ggplot2.
Intro_to_R
Introduction to R course for NERC E4 DTP
MScIntroGitGithub
Introduction to git and GitHub in RStudio. Part of the MSc Ecology, Evolution and Biodiversity at the University of Edinburgh.
Sparrow_Genomic_Prediction
susjoh's Repositories
susjoh/fibonacci
Example R package generating Fibonacci Sequences And Plots
susjoh/Intro_to_R
Introduction to R course for NERC E4 DTP
susjoh/ggpedigree
Draw nice pedigrees with ggplot2.
susjoh/2020_Soay_Recomb_GWAS
Scripts for updated GWAS of recombination rate in Soay sheep
susjoh/genedroppeR
R Package to conduct gene-drop analyses through pedigrees.
susjoh/wildsim
Simulate and analyse datasets for genome-wide association studies using QMSim & GCTA
susjoh/2024_Sparrow_Recomb_GWAS
Code for the MBE article: The genetic architecture of recombination rates is polygenic and differs between the sexes in wild house sparrows (Passer domesticus)
susjoh/crimaptools
R Library for preparing input files, running, and parsing output for the programme CRI-MAP.
susjoh/Deer_Chromosomal_History
susjoh/Intro_to_Stats_in_R
Course notes for E3 DTP. Part 2 - Introduction to R Markdown and Basic Statistics.
susjoh/Deer_Recombination_GWAS
susjoh/E4StatsTutorials
PhD Course on "Using R as a Research Tool" for the University of Edinburgh NERC E4 DTP
susjoh/MScIntroGitGithub
Introduction to git and GitHub in RStudio. Part of the MSc Ecology, Evolution and Biodiversity at the University of Edinburgh.
susjoh/Sparrow_Genomic_Prediction
susjoh/Unicorn_Imputation
Selecting Unicorns for Imputation
susjoh/adelie_penguins
An example collaborative project on Adelie penguins.
susjoh/DeerMapv4
Code for creating a linkage map in red deer
susjoh/Drifting_Pandas
Practical that simulates drift in a Red Panda population.
susjoh/ESEB_Language
susjoh/FieldZoology3
susjoh/imputation_eddie
susjoh/meetingsR
A list of R conferences and user groups
susjoh/MScDataVisualisation
susjoh/pedantry
Pedigree tools for R
susjoh/penguin_project
An example R project using git and github.
susjoh/rectree
R library for Sex and Breeding Systems practical on recombination rate variation across the tree of life.
susjoh/sheep_ID
Code for our paper "Genetic architecture and lifetime dynamics of inbreeding depression in a wild mammal."
susjoh/sheep_microsats
Information on sheep microsatellite primers from early linkage mapping & QTL papers.
susjoh/susjoh
susjoh/yapp
Tools to analyse genetic data in pedigrees