Wrong decription
Closed this issue · 2 comments
andreyurch commented
Hello,
It seems that command in the examples
bwa mem -M example.fasta example.1.fq example.2.fq | samtools view - > example.bam
produces a SAM file instead of a BAM. To receive a BAM we need to use
bwa mem -M example.fasta example.1.fq example.2.fq | samtools view -Sb - > example.bam
svm-zhang commented
Hello @andreyurch,
You are absolutely correct. Thanks very much for pointing it out! I will update the README. :)
Simo
svm-zhang commented