Pinned Repositories
argweaver
Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)
atomic-algolia
An NPM package for running atomic updates to an Algolia indices
base-ml
clover-iiif
Extensible IIIF front-end toolkit and Manifest viewer. Accessible. Composable. Open Source.
deep-review
A collaboratively written review paper on deep learning, genomics, and precision medicine
discourse-machine-learning
An open source project that gives tools and utilities for applying machine learning tools to Discourse Forums (https://discourse.org).
proplot
🎨 A succinct matplotlib wrapper for making beautiful, publication-quality graphics
swamidass_cv
S. Joshua Swamidass's CV
wsi
xenosite
swamidass's Repositories
swamidass/xenosite
swamidass/atomic-algolia
An NPM package for running atomic updates to an Algolia indices
swamidass/discourse-machine-learning
An open source project that gives tools and utilities for applying machine learning tools to Discourse Forums (https://discourse.org).
swamidass/proplot
🎨 A succinct matplotlib wrapper for making beautiful, publication-quality graphics
swamidass/swamidass_cv
S. Joshua Swamidass's CV
swamidass/base-ml
swamidass/clover-iiif
Extensible IIIF front-end toolkit and Manifest viewer. Accessible. Composable. Open Source.
swamidass/deep-review
A collaboratively written review paper on deep learning, genomics, and precision medicine
swamidass/hugoDocs
The source for https://gohugo.io/
swamidass/linkedom
A triple-linked lists based DOM implementation.
swamidass/Mash
Fast genome and metagenome distance estimation using MinHash
swamidass/wsi
swamidass/MathJax-src
MathJax source code for version 3 and beyond
swamidass/molcloud
Make a bunch of molecules
swamidass/msms
A coalsecent simulator with selection
swamidass/msprime
A reimplementation of Hudson's classical ms simulator for modern data sets.
swamidass/one-click-hugo-cms
swamidass/opentelemetry-cpp-contrib
swamidass/pandasthumb.github.io
swamidass/prov-gigapath
Prov-GigaPath: A whole-slide foundation model for digital pathology from real-world data
swamidass/rdkit
The official sources for the RDKit library
swamidass/rdkit-stubs
swamidass/ScaffoldGraph
ScaffoldGraph is an open-source cheminformatics library, built using RDKit and NetworkX, for the generation and analysis of scaffold networks and scaffold trees.
swamidass/sourmash
Compute and compare MinHash signatures for DNA data sets.
swamidass/starter-hugo-research-group
swamidass/swamidass
swamidass/swamidass.github.io
A beautiful, simple, clean, and responsive Jekyll theme for academics
swamidass/tailwind-nextjs-starter-blog
This is a Next.js, Tailwind CSS blogging starter template. Comes out of the box configured with the latest technologies to make technical writing a breeze. Easily configurable and customizable. Perfect as a replacement to existing Jekyll and Hugo individual blogs.
swamidass/tensorflow
Computation using data flow graphs for scalable machine learning
swamidass/test-submodule-netlify